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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3665091_3665523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3665091 - 3665523

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

ACTGCTTTATTT

Flanking Amino Acid:

SCPTVSNPDQKDTDHDLVGD

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

72.4

0.56

79.3

29.5

Major PPT

83.1

0.74

0.8

77.2

36.9

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

54.9

0.23

1.7

69.31

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010165

3662186 - 3677843

15658