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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3668372_3668536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3668372 - 3668536

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTTTTTTTTCA

Flanking Amino Acid:

VPNSICINTRGSYKCGACKP

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

84.2

33.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

100

1.12

0.4

100

Minor 5ss

40.6

-1.1

51.6

45.1

Minor BPS

44.4

-0.4

3.5

74.12

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010165

3662186 - 3677843

15658