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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3707515_3708108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3707515 - 3708108

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

TCTTTACTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTTCTTTACTG

Flanking Amino Acid:

DYDKKLKESQTQDNITVRWD

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.2

39.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

73.9

0.54

0.9

74.4

35.4

Minor 5ss

36.4

-1.5

3.4

50.2

46.4

Minor BPS

0.46

1.6

74.65

38.4

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305