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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3708782_3709437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3708782 - 3709437

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAGA

5'SS Class:

major

3'SS Sequence:

TCCCTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

CTTCCCTCATTT

Flanking Amino Acid:

DFVWKSTSFDRMQSALKTFA

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.2

41.4

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

0.68

0.8

77.1

Minor 5ss

37.8

-1.4

3.1

49.1

46.7

Minor BPS

53.6

0.19

1.9

73.65

43.4

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305