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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3709598_3709717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3709598 - 3709717

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATCA

5'SS Class:

major

3'SS Sequence:

TAAATTTCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TAGTCTTAAATT

Flanking Amino Acid:

QGLPDLNHSQVYAVKTVLQR

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.4

35.1

Major BPS

77.8

0.69

78.2

31.8

Major PPT

0.5

0.9

66.1

40.3

Minor 5ss

43.8

-0.7

2.9

57.7

46.5

Minor BPS

63.5

0.5

1.6

76.46

40.9

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305