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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3709837_3710126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3709837 - 3710126

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAG

U12 Branch Point Sequence:

TTTTGTGTATTT

Flanking Amino Acid:

IVYHLARQGNGPVLVCAPSN

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

78.1

36.3

Major BPS

55.3

0.13

1.6

45.5

Major PPT

73.3

0.53

1.1

71.7

42.9

Minor 5ss

35.7

-1.6

42.9

43.6

Minor BPS

46.1

-0.2

2.5

74.81

43.2

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305