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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3711733_3711951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3711733 - 3711951

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TGGTACTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

AACTTTTTACTT

Flanking Amino Acid:

EGSLQNGVTAADRVKKGFDF

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.7

83.1

30.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

77.4

0.62

0.9

73.6

41.5

Minor 5ss

29.6

-2.3

2.6

32.5

42.4

Minor BPS

53.7

0.19

1.5

66.17

39.5

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305