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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3712070_3713462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3712070 - 3713462

Intron Length:

1393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTTCCTTAGAT

Flanking Amino Acid:

IASSGTSYLNRTEAANVEKI

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

75.7

32.1

Major BPS

0.82

0.8

24.9

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

34.3

-1.8

3.6

49.9

46.6

Minor BPS

76.6

0.91

1.6

93.73

33.8

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305