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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3715573_3716294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3715573 - 3716294

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

GTCATGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CTTTGTCTAACT

Flanking Amino Acid:

PRKLVNTINPGARFMTTAMY

Intron Amino Acid Position:

925

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

78.2

32.4

Major BPS

72.5

0.56

1.2

39.9

Major PPT

73.9

0.54

69.3

41.7

Minor 5ss

-0.4

2.8

63.8

41.6

Minor BPS

56.3

0.27

2.1

80.09

42.2

Associated Gene:

Gene:

UPF1

Ensembl Gene ID:

ENSAPLG00000009175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022137

3698622 - 3717926

19305

ENSAPLT00000009581

3698622 - 3717926

19305