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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3727429_3728265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3727429 - 3728265

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

TCTGCCCCACCA

Flanking Amino Acid:

NVGCLTFSISWFWFRLYWFP

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

69.5

0.49

71.3

30.3

Major PPT

68.1

0.41

0.9

59.7

36.8

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

44.5

-0.4

2.2

59.96

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009302

3726230 - 3737859

11630