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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3728894_3729415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3728894 - 3729415

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACAGTAA

5'SS Class:

major

3'SS Sequence:

TGTCCCGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CTGGGCTCACCC

Flanking Amino Acid:

FFYDPPSVFYGWKKGMDVPT

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.1

58.1

37.2

Major BPS

58.6

0.22

1.5

38.9

Major PPT

0.54

0.9

69.9

36.6

Minor 5ss

34.5

-1.8

3.5

46.5

Minor BPS

41.1

-0.7

2.2

49.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009302

3726230 - 3737859

11630