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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3741624_3741891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3741624 - 3741891

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

TTTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

EGVLQEALDKDSSHPETLIN

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.1

23.6

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

COPE

Ensembl Gene ID:

ENSAPLG00000008757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009123

3740557 - 3745212

4656