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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3742048_3743310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3742048 - 3743310

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

CCTCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATGAA

U12 Branch Point Sequence:

ACGTCATGAAAC

Flanking Amino Acid:

LATAWVNLAIGGEKLQDAYY

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.3

36.6

Major BPS

62.9

0.32

1.1

53.9

41.5

Major PPT

0.65

0.7

72.6

25.5

Minor 5ss

36.4

-1.5

2.9

46.4

36.1

Minor BPS

47.8

-0.1

1.8

56.45

41.4

Associated Gene:

Gene:

COPE

Ensembl Gene ID:

ENSAPLG00000008757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009123

3740557 - 3745212

4656