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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3761742_3762602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3761742 - 3762602

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AGCCCCCTCACT

Flanking Amino Acid:

EREETLQKLQELEARNAELE

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

75.8

0.58

72.7

37.5

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

47.4

-0.1

2.1

65.59

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008507

3759963 - 3786362

26400