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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3770005_3770417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3770005 - 3770417

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTGG

5'SS Class:

major

3'SS Sequence:

CGCTCCCCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTCAGTTCAGCA

Flanking Amino Acid:

GFASEQHLSQFAEKFQEVKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.3

45.8

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

0.41

0.8

58.5

33.1

Minor 5ss

41.7

-0.9

3.2

55.9

48.3

Minor BPS

-0.5

2.1

55.91

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008507

3759963 - 3786362

26400