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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3770550_3771478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3770550 - 3771478

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TTTTCTCTGACT

Flanking Amino Acid:

YRIISVGGTKAIINSTITPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.4

43.3

Major BPS

69.1

0.47

60.7

37.6

Major PPT

77.5

0.62

0.7

71.6

26.5

Minor 5ss

32.6

-2

3.5

48.3

47.5

Minor BPS

72.7

0.8

1.6

92.05

30.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008507

3759963 - 3786362

26400