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Intron Name: Anas_platyrhynchos_platyrhynchos_29_377912_380430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

377912 - 380430

Intron Length:

2519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGAGAGC

5'SS Class:

major

3'SS Sequence:

TGCGCTCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CTAACCCTGACT

Flanking Amino Acid:

GVKSRQCKYGEEMAYVTLSH

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

52.8

41.1

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

61.4

0.26

1.1

60.4

35.7

Minor 5ss

30.1

-2.3

3.4

33.4

42.1

Minor BPS

56.6

0.29

1.8

73.87

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002772

377747 - 398421

20675