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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3816626_3817165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3816626 - 3817165

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGGC

5'SS Class:

major

3'SS Sequence:

TTCCTCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTCCTCCTGACA

Flanking Amino Acid:

PQRAALCQAEDKGAVWSLLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

58.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

75.9

0.58

0.9

72.2

32.5

Minor 5ss

29.8

-2.3

3.5

40.6

Minor BPS

54.8

0.14

1.7

68.33

37.8

Associated Gene:

Gene:

ARMC6

Ensembl Gene ID:

ENSAPLG00000006480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006719

3816414 - 3823233

6820