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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3819764_3820347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3819764 - 3820347

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTGCTGAACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TCTTGCTGAACT

Flanking Amino Acid:

SLLADSIDHPDVVKQVLSAI

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

71.7

33.7

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

65.7

0.35

42.1

Minor 5ss

34.2

-1.8

3.2

45.6

43.6

Minor BPS

66.1

0.58

1.9

84.75

41.8

Associated Gene:

Gene:

ARMC6

Ensembl Gene ID:

ENSAPLG00000006480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006719

3816414 - 3823233

6820