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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3838728_3839224_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3838728 - 3839224

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCCACGTGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TAGCGCAGATTT

Flanking Amino Acid:

RARMAVTPKEMYSNIVHVFI

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

64.5

0.36

65.2

28.2

Major PPT

54.4

0.1

46.4

41.2

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

37.5

-0.8

52.56

42.1

Associated Gene:

Gene:

SLC25A42

Ensembl Gene ID:

ENSAPLG00000006582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006825

3832775 - 3840106

7332