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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3847795_3847886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3847795 - 3847886

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

CTCTGTCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CCCTCTGTCACA

Flanking Amino Acid:

LHCALLLKTLGHHSWGLYPE

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

67.8

43.5

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

70.4

0.46

0.9

64.6

35.7

Minor 5ss

32.2

-2

3.1

34.8

41.4

Minor BPS

44.3

-0.4

2.3

53.6

45.8

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006910

3847538 - 3850611

3074

ENSAPLT00000018969

3846918 - 3850611

3694