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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3847984_3848070_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3847984 - 3848070

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCCTGGCG

5'SS Class:

weak_major

3'SS Sequence:

CCTCTGTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

CCACACTGATCC

Flanking Amino Acid:

RIAAVEIQRKITRIYCYVSV

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.4

46.5

40.7

Major BPS

71.2

0.53

37.5

Major PPT

68.8

0.42

63.1

37.1

Minor 5ss

-3

3.3

42.5

Minor BPS

42.6

-0.5

1.8

46.7

41.7

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018969

3846918 - 3850611

3694

ENSAPLT00000006910

3847538 - 3850611

3074