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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3848246_3848403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3848246 - 3848403

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

CCTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCGCAG

U12 Branch Point Sequence:

TTTTCCTGCAGC

Flanking Amino Acid:

HAPMGKQTVQLMSDSAYNTA

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

51.3

45.7

Major BPS

-0.6

1.6

39.9

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

38.6

-1.3

3.4

56.4

47.8

Minor BPS

54.6

0.13

2.2

75.11

41.5

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018969

3846918 - 3850611

3694

ENSAPLT00000006910

3847538 - 3850611

3074