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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3848790_3848997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3848790 - 3848997

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

GTTCTTTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCAAC

U12 Branch Point Sequence:

TGTTCTTTGCGC

Flanking Amino Acid:

SVLKQRGWEWTVPLAKLAFK

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

65.8

42.7

Major BPS

41.7

-0.5

1.3

42.1

38.6

Major PPT

76.4

0.59

0.9

72.4

37.6

Minor 5ss

35.5

-1.6

2.8

39.4

39.7

Minor BPS

42.1

-0.6

3.5

65.85

40.5

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006910

3847538 - 3850611

3074

ENSAPLT00000018969

3846918 - 3850611

3694