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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3849059_3849137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3849059 - 3849137

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTACG

5'SS Class:

major

3'SS Sequence:

TTGCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

AGCACCCCACTC

Flanking Amino Acid:

EDYLEFGLEPGLAGVSSNLE

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

62.3

43.9

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

74.7

0.56

0.8

66.3

35.8

Minor 5ss

28.8

-2.4

2.8

25.6

36.5

Minor BPS

38.8

-0.8

1.9

43.34

37.8

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006910

3847538 - 3850611

3074

ENSAPLT00000018969

3846918 - 3850611

3694