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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3849290_3849651_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

3849290 - 3849651

Intron Length:

362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

CCCACGCCCGCAG|T

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CTTTCCTTGACG

Flanking Amino Acid:

LWCLLTVIFSVKVFFMVMRH

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.1

-0

1.3

49.7

42.2

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

61.3

0.25

0.9

53.2

30.9

Minor 5ss

1.41

0.9

85.2

32.2

Minor BPS

80.4

0.81

1.2

78.7

38.3

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018969

3846918 - 3850611

3694

ENSAPLT00000006910

3847538 - 3850611

3074