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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3849809_3849959_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3849809 - 3849959

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACCCCC

5'SS Class:

weak_major

3'SS Sequence:

CGTCCCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GGCGCGGTGACG

Flanking Amino Acid:

TSPITAVDALVLRYFLEYQW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.3

51.9

45.3

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

68.2

0.41

0.8

58.1

33.1

Minor 5ss

45.2

-0.5

2.9

61.8

42.6

Minor BPS

-1.1

2.5

39.39

44.4

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018969

3846918 - 3850611

3694

ENSAPLT00000006910

3847538 - 3850611

3074