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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3850058_3850316_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3850058 - 3850316

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGGG

5'SS Class:

major

3'SS Sequence:

GTTTCCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAG

U12 Branch Point Sequence:

TTTCCCCTACAG

Flanking Amino Acid:

GKQRPKAKRDRRVNGVLDDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

54.8

44.4

Major BPS

48.3

-0.1

1.5

55.2

38.9

Major PPT

80.8

0.69

0.8

73.6

31.6

Minor 5ss

21.8

-3.3

3.4

28.2

Minor BPS

48.2

-0.2

2.1

63.25

43.9

Associated Gene:

Gene:

TMEM161A

Ensembl Gene ID:

ENSAPLG00000006657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018969

3846918 - 3850611

3694