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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3863562_3864771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3863562 - 3864771

Intron Length:

1210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGAGCG

5'SS Class:

major

3'SS Sequence:

TCTCTCGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

CTTTCAGTAATT

Flanking Amino Acid:

EPEMQLKVKKVTDKFTESMY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.4

54.8

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

0.72

0.8

76.3

32.2

Minor 5ss

24.8

-2.9

3.2

30.6

42.8

Minor BPS

55.9

0.26

2.3

80.74

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019878

3863257 - 3864808

1552