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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3867531_3868490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3867531 - 3868490

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

GCTGTCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

CTTCACCCAGCG

Flanking Amino Acid:

IETVRHLLEWGADPHALAKE

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

58.7

0.22

1.2

Major PPT

0.38

0.9

58.3

38.4

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

39.1

-0.9

2.1

47.36

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017141

3865621 - 3869863

4243