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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3870792_3870950_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3870792 - 3870950

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGATCC

5'SS Class:

major

3'SS Sequence:

GGCTCTGGATAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACAGAT

U12 Branch Point Sequence:

TTGCACAGATTC

Flanking Amino Acid:

ISFLPLEVFRLKITFENSTD

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

60.6

39.6

Major BPS

0.1

50.3

35.4

Major PPT

-0.1

1.2

49.1

43.1

Minor 5ss

37.7

-1.4

3.2

43.2

Minor BPS

39.9

-0.7

1.9

50.99

39.5

Associated Gene:

Gene:

NR2C2AP

Ensembl Gene ID:

ENSAPLG00000016443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017161

3870708 - 3874681

3974