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Intron Name: Anas_platyrhynchos_platyrhynchos_29_387240_388465_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

387240 - 388465

Intron Length:

1226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TCTTGGAGGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

ATTTTTAAGACT

Flanking Amino Acid:

EQYILAIMNIVAKLFQDSSL

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

32.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

59.8

0.22

1.2

58.3

46.2

Minor 5ss

41.2

-1

3.4

64.1

41.5

Minor BPS

48.5

-0

1.9

73.31

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002772

377747 - 398421

20675