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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3884926_3889235_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3884926 - 3889235

Intron Length:

4310

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCT|GCACGGCCA

5'SS Class:

weak_major

3'SS Sequence:

CGATCCGTGCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCGAT

U12 Branch Point Sequence:

CTGCTCCTACCC

Flanking Amino Acid:

MLMGPHPNNPCLHGGTC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.5

51.3

39.3

Major BPS

50.9

0.02

1.4

52.1

45.2

Major PPT

58.4

0.19

1.1

43.6

Minor 5ss

22.6

-3.2

4.2

39.9

45.6

Minor BPS

45.6

-0.3

1.9

55.65

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029853

3884905 - 3891537

6633