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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3889903_3890277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3889903 - 3890277

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGGGGT

5'SS Class:

major

3'SS Sequence:

CCTTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCC

Flanking Amino Acid:

HSQEEHGFINSFGHENTWIG

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.1

44.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

84.9

0.78

0.7

76.8

31.9

Minor 5ss

32.1

-2

3.9

51.2

46.7

Minor BPS

46.2

-0.3

1.9

51.61

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029853

3884905 - 3891537

6633