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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3906838_3907676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3906838 - 3907676

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAATAG

5'SS Class:

major

3'SS Sequence:

TGTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAA

U12 Branch Point Sequence:

ATATGCAAAATA

Flanking Amino Acid:

KFMETFKALKEGREPDYSEY

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

0.9

67.1

34.5

Major BPS

0.2

1.3

69.6

37.5

Major PPT

83.1

0.74

0.8

77.4

31.3

Minor 5ss

31.2

-2.2

3.1

37.5

47.2

Minor BPS

44.7

-0.4

2.2

59.39

40.6

Associated Gene:

Gene:

SUGP1

Ensembl Gene ID:

ENSAPLG00000002500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002534

3904591 - 3922176

17586