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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3907784_3908042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3907784 - 3908042

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTTAC

U12 Branch Point Sequence:

GCCGCGTTACTG

Flanking Amino Acid:

LRRMEMDKTREWAEQLTQMG

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

64.9

41.2

Major BPS

46.5

-0.2

1.4

Major PPT

68.8

0.42

1.1

65.7

40.9

Minor 5ss

32.7

-2

3.1

40.1

Minor BPS

39.9

-0.9

2.3

38.65

45.3

Associated Gene:

Gene:

SUGP1

Ensembl Gene ID:

ENSAPLG00000002500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002534

3904591 - 3922176

17586