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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3908221_3908864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3908221 - 3908864

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CTGCCTGTAAAC

Flanking Amino Acid:

QKKQLKEQQEMQQMYDMIMK

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

63.3

41.2

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

76.5

0.6

0.7

69.8

31.1

Minor 5ss

32.1

-2

3.2

43.2

43.9

Minor BPS

46.3

-0.3

2.1

56.44

42.3

Associated Gene:

Gene:

SUGP1

Ensembl Gene ID:

ENSAPLG00000002500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002534

3904591 - 3922176

17586