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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3914330_3916121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3914330 - 3916121

Intron Length:

1792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

ATCCCCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

LQNNRENHAFRFLYEPNSKG

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.6

0.44

0.8

27.5

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

SUGP1

Ensembl Gene ID:

ENSAPLG00000002500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002534

3904591 - 3922176

17586