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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3921928_3922139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3921928 - 3922139

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

CCCCCCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTCTCTT

Flanking Amino Acid:

SKMDNPREAPGKASRWFGVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.2

56.4

39.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

61.8

0.27

0.9

52.7

31.1

Minor 5ss

30.2

-2.3

3.4

34.1

41.7

Minor BPS

40.5

-0.6

3.6

75.66

41.6

Associated Gene:

Gene:

SUGP1

Ensembl Gene ID:

ENSAPLG00000002500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002534

3904591 - 3922176

17586