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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3922904_3922996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3922904 - 3922996

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAT

U12 Branch Point Sequence:

TGCTCGAGGACT

Flanking Amino Acid:

DQARGHLEKAWLISQQIPQF

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

64.7

0.37

1.2

39.8

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

43.5

-0.4

2.4

65.81

44.5

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917