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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3923015_3923231_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

3923015 - 3923231

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CTGGTGCTGCTAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTCGCTTAACT

Flanking Amino Acid:

LEKAWLISQQIPQFEDVKFE

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

65.1

41.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

57.9

0.18

1.1

50.5

43.9

Minor 5ss

95.8

1.54

0.7

90.3

20.6

Minor BPS

70.7

0.73

1.8

86.57

38.9

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917