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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3924071_3925727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3924071 - 3925727

Intron Length:

1657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTTTTCGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGAAA

U12 Branch Point Sequence:

AAATGCTGACCA

Flanking Amino Acid:

WHCRLLFQLAQLHTLEKDLV

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

34.3

Major BPS

48.4

-0.1

1.4

56.3

37.2

Major PPT

90.3

0.91

0.7

88.7

28.3

Minor 5ss

36.5

-1.5

3.4

54.7

43.6

Minor BPS

45.7

-0.3

2.1

56.99

41.8

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917