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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3927065_3927469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3927065 - 3927469

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATCAT

U12 Branch Point Sequence:

TCTGTCTGAAGT

Flanking Amino Acid:

QVTHYLDAGQVKSVKPCLKQ

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

71.3

34.3

Major BPS

62.7

0.32

1.3

40.9

Major PPT

85.1

0.79

0.8

80.3

31.4

Minor 5ss

26.5

-2.7

3.1

32.6

42.2

Minor BPS

52.3

0.15

1.9

71.74

45.4

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917