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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3927617_3928050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3927617 - 3928050

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

TGCTCTCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTTTTGTAATC

Flanking Amino Acid:

KEHMCVLVYLVTVMHSMQAG

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.9

41.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.7

0.44

65.8

Minor 5ss

34.4

-1.8

2.9

39.9

40.3

Minor BPS

54.9

0.13

68.66

38.1

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917