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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3928142_3928803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3928142 - 3928803

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

ACTTACTGAATT

Flanking Amino Acid:

KALMQLEKLKMLDCSPILSS

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

76.2

39.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

0.7

0.8

77.5

31.2

Minor 5ss

37.6

-1.4

3.3

41.4

Minor BPS

61.5

0.44

1.6

76.43

40.1

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917