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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3933687_3935414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3933687 - 3935414

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGACGAT

U12 Branch Point Sequence:

TTTCTGGTGAGC

Flanking Amino Acid:

VQLWSSALLRDLNKACGNAM

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

45.3

-0.3

1.3

38.3

41.2

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

39.2

-0.8

2.6

58.09

41.5

Associated Gene:

Gene:

MAU2

Ensembl Gene ID:

ENSAPLG00000002818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002891

3922418 - 3938334

15917