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Intron Name: Anas_platyrhynchos_platyrhynchos_29_395758_398394_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

395758 - 398394

Intron Length:

2637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCACTATT

5'SS Class:

weak_major

3'SS Sequence:

TTCCTCCCCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

AGAATGTCACTC

Flanking Amino Acid:

MLGAQTSFQEFLSSLDHYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

1.4

75.5

40.6

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

56.2

0.14

1.6

64.9

30.9

Minor 5ss

44.3

-0.6

2.7

61.1

37.1

Minor BPS

35.4

-1.1

2.1

38.82

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002772

377747 - 398421

20675