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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4005258_4005476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4005258 - 4005476

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CAATTTTGAATT

Flanking Amino Acid:

GHVMNRGGIPGRGGFTQGGN

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.9

41.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.9

0.65

0.9

77.1

37.1

Minor 5ss

33.4

-1.9

2.9

35.8

40.7

Minor BPS

55.2

0.24

1.4

66.09

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006607

4004863 - 4020887

16025