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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4005856_4006570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4005856 - 4006570

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTTAGTGCG

5'SS Class:

major

3'SS Sequence:

TTATTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTTTATTT

Flanking Amino Acid:

NEGRGIPPQTRDGRDWGDHG

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

62.2

42.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.6

0.71

87.1

30.6

Minor 5ss

29.8

-2.3

2.9

35.5

40.5

Minor BPS

62.9

0.48

1.5

80.46

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006607

4004863 - 4020887

16025