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Intron Name: Anas_platyrhynchos_platyrhynchos_29_4006693_4007496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006693 - 4007496

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTACCAGAACT

Flanking Amino Acid:

SRGIPDRDGQHYPDERHGGP

Intron Amino Acid Position:

818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

38.4

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.74

0.9

73.9

41.1

Minor 5ss

-2.4

3.2

46.1

Minor BPS

57.7

0.32

1.8

79.08

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006607

4004863 - 4020887

16025